Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M0R4_LEPOCUncharacterized protein. (193 aa)    
Predicted Functional Partners:
uso1
USO1 vesicle transport factor.
   
 0.959
stx5
Syntaxin 5A; Belongs to the syntaxin family.
   
 0.950
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.943
W5M713_LEPOC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.937
trappc8
Trafficking protein particle complex 8.
    
 0.924
LOC102691742
CHM Rab escort protein.
    
 0.922
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.916
bet1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.916
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.911
golga2
Golgin A2.
    
 0.910
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: medium (54%) [HD]