Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
csmd2CUB and Sushi multiple domains 2. (3609 aa)    
Predicted Functional Partners:
tssc4
Tumor suppressing subtransferable candidate 4.
      
 0.602
W5LZU4_LEPOC
Tenascin C.
    
  0.594
tnr
Tenascin R (restrictin, janusin).
    
  0.594
TNN
Tenascin N.
    
  0.594
zhx2
Zinc fingers and homeoboxes 2a.
     
 0.498
kctd15
Potassium channel tetramerization domain containing 15a.
      
 0.459
W5N6Q3_LEPOC
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
 0.431
W5NLB9_LEPOC
C1q and TNF related 4.
    
 0.419
babam1
BRISC and BRCA1 A complex member 1.
      
 0.417
zc3hc1
Zinc finger, C3HC-type containing 1.
      
 0.417
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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