Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5M0S9_LEPOCGAR domain-containing protein. (288 aa)    
Predicted Functional Partners:
mapre1
Microtubule-associated protein, RP/EB family, member 1a.
    
 
 0.840
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
   0.655
mapre3
Microtubule-associated protein, RP/EB family, member 3b.
    
   0.655
W5NCR5_LEPOC
PIH1 domain containing 3.
   
 
 0.641
mrps5
Mitochondrial ribosomal protein S5.
      
 0.624
eny2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.605
W5MQE4_LEPOC
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.573
RASL10B
RAS like family 10 member B.
    
 0.569
LRRC56
Leucine rich repeat containing 56.
    
 0.563
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.556
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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