STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102688887Retinoic acid receptor responder 3-like. (165 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.993
W5MF14_LEPOC
Protein interacting with cyclin A1.
   
 0.885
W5MLJ2_LEPOC
Phospholipase A2 group III.
   
 0.885
pnpla7
Patatin-like phospholipase domain containing 7b.
   
 0.881
LOC102698342
Patatin-like phospholipase domain containing 6.
   
 0.881
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
  0.876
pla2g7
Platelet-activating factor acetylhydrolase.
     
 0.871
CYP4F8
Cytochrome P450 family 4 subfamily F member 8; Belongs to the cytochrome P450 family.
    
 0.870
LOC102696699
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
    
  0.867
pla2g10
Phospholipase A(2).
     
 0.866
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.