Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
W5M0T5_LEPOCAIG1-type G domain-containing protein. (910 aa)    
Predicted Functional Partners:
uso1
USO1 vesicle transport factor.
   
 0.751
golga2
Golgin A2.
   
 0.733
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.732
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.713
W5NFN1_LEPOC
Zgc:162964.
    
 0.603
W5MLW0_LEPOC
Protein tyrosine kinase 2aa.
    
 0.575
ptk2b
Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.575
ckap5
Cytoskeleton associated protein 5.
   
 0.569
tmed10
Transmembrane p24 trafficking protein 10.
    
  0.552
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
   
 0.538
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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