Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADAP1ArfGAP with dual PH domains 1. (377 aa)    
Predicted Functional Partners:
rasd1
RAS, dexamethasone-induced 1.
    
 
 0.550
rps6kl1
Ribosomal protein S6 kinase-like 1.
      
 0.524
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
      
 0.524
gak
Cyclin G associated kinase.
    
 
 0.523
W5NMK2_LEPOC
Myeloid-associated differentiation marker-like 2.
      
 0.519
ncl
Nucleolin.
    
 
 0.515
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
    
 
 0.514
utp6
UTP6 small subunit processome component.
      
 0.513
sh3yl1
SH3 and SYLF domain containing 1.
    
 
 0.506
W5N8M8_LEPOC
Transcription elongation factor, mitochondrial.
      
 0.504
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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