Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STMN3Stathmin-like 3. (212 aa)    
Predicted Functional Partners:
stmn2
Stathmin; Belongs to the stathmin family.
   
   0.846
W5LXE3_LEPOC
TOX high mobility group box family member 2.
    
 0.843
SNTA1
Syntrophin alpha 1.
    
 
 0.836
kif5a
Kinesin family member 5A, a; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.730
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.723
W5N7N1_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 
 0.684
slc32a1
Solute carrier family 32 member 1.
   
  
 0.644
W5MQ69_LEPOC
Microtubule-associated protein.
    
 
 0.637
LOC102685578
Aa_trans domain-containing protein.
   
  
 0.580
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.554
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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