STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102690143Cytochrome c oxidase assembly factor COX19. (93 aa)    
Predicted Functional Partners:
LOC102685731
Cytochrome c oxidase assembly homolog 15 (yeast).
     
 0.974
W5MIG3_LEPOC
Uncharacterized protein.
   
 0.967
W5N3Y4_LEPOC
CoA synthase.
   
 0.967
LOC102693018
Cytochrome c oxidase assembly factor COX16.
   
 
 0.962
LOC102692236
Cytochrome C oxidase assembly factor 5.
   
 
 0.956
W5N3N0_LEPOC
Cytochrome C oxidase assembly factor 3a.
   
 
 0.953
LOC102697213
Cytochrome c oxidase copper chaperone COX17.
     
 0.940
LOC102686958
SCO cytochrome c oxidase assembly protein 2.
  
 
 0.902
LOC102698903
Cytochrome c oxidase assembly homolog 11 (yeast).
   
 
 0.889
ppcs
Phosphopantothenoylcysteine synthetase.
    
 0.881
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.