STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102690143Cytochrome c oxidase assembly factor COX19. (93 aa)    
Predicted Functional Partners:
W5MIG3_LEPOC
Uncharacterized protein.
  
 0.962
W5N3Y4_LEPOC
CoA synthase.
  
 0.962
pank4
Pantothenate kinase 4; Belongs to the type II pantothenate kinase family.
     
 0.946
ppcs
Phosphopantothenoylcysteine synthetase.
    
 0.910
mthfr
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.867
W5MDF7_LEPOC
Folylpolyglutamate synthase.
    
 0.860
HLCS
Holocarboxylase synthetase.
  
 
 0.858
TSTD2
Thiosulfate sulfurtransferase like domain containing 2.
     
 0.825
tyms
Thymidylate synthetase.
    
 0.823
W5N3X4_LEPOC
MAX dimerization protein MLX.
     
 0.823
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.