STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35a5Solute carrier family 35 member A5. (465 aa)    
Predicted Functional Partners:
slc35b4
Solute carrier family 35 member B4.
      
 0.534
itm2c
Integral membrane protein 2Ca.
      
 0.513
fastkd3
FAST kinase domains 3.
    
 0.479
pepd
Peptidase D.
    
 0.473
W5N0Q2_LEPOC
X-prolyl aminopeptidase 3, mitochondrial.
    
 0.473
xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble; Belongs to the peptidase M24B family.
    
 0.473
xpnpep2
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound; Belongs to the peptidase M24B family.
    
 0.473
gss
Glutathione synthetase.
   
 
  0.459
slc35c2
Solute carrier family 35 member C2.
   
  
 0.441
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
      
 0.429
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.