Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP89Centrosomal protein 89. (859 aa)    
Predicted Functional Partners:
cep83
Centrosomal protein 83.
     
 0.987
CEP164
Centrosomal protein 164.
     
 0.960
clg5h3orf14
Si:dkey-274m17.3.
    
 
 0.931
W5N1Z9_LEPOC
Ninein (GSK3B interacting protein).
     
 0.912
W5M278_LEPOC
EF-hand domain-containing protein.
    
 0.890
FBF1
Fas binding factor 1.
     
 0.838
sclt1
Sodium channel and clathrin linker 1.
     
 0.790
cep76
Centrosomal protein 76.
     
 0.761
W5N8T9_LEPOC
ATR interacting protein.
   
    0.720
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
   
    0.719
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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