Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gmeb2Glucocorticoid modulatory element binding protein 2. (574 aa)    
Predicted Functional Partners:
sdc1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 
 0.796
usp40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
    
 
 0.725
W5LWP2_LEPOC
Dehydrogenase/reductase (SDR family) member 4.
    
   0.686
W5LZK3_LEPOC
Link domain-containing protein.
    
 
 0.685
W5NC59_LEPOC
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
      
 0.630
W5LXZ7_LEPOC
Nuclear receptor interacting protein 1b.
      
 0.623
hadhb
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
    
   0.623
d2hgdh
D-2-hydroxyglutarate dehydrogenase.
   
 
 0.572
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
   0.565
hadha
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.
    
   0.564
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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