STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102688627Si:ch211-236l14.4; Belongs to the glycosyl hydrolase 31 family. (687 aa)    
Predicted Functional Partners:
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.781
prkcsh
Protein kinase C substrate 80K-H.
   
 0.781
LOC102688851
Uncharacterized protein.
   
 0.781
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
    
 0.691
AMY1C
Alpha-amylase.
  
 
 0.684
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.658
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
    
 0.653
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 
 0.653
mogs
Mannosyl-oligosaccharide glucosidase.
   
 0.649
NUP54
Nucleoporin 54.
    
 0.638
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.