Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102694494 | gnb5 | ENSLOCP00000013238 | ENSLOCP00000016462 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Guanine nucleotide binding protein (G protein), beta 5b. | 0.970 |
LOC102694494 | rasd1 | ENSLOCP00000013238 | ENSLOCP00000002157 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | RAS, dexamethasone-induced 1. | 0.856 |
SHANK3 | W5NJB2_LEPOC | ENSLOCP00000020722 | ENSLOCP00000020721 | SH3 and multiple ankyrin repeat domains 3a. | Uncharacterized protein. | 0.972 |
SHANK3 | dock4 | ENSLOCP00000020722 | ENSLOCP00000019609 | SH3 and multiple ankyrin repeat domains 3a. | Dedicator of cytokinesis 4b; Belongs to the DOCK family. | 0.475 |
SHANK3 | rasd1 | ENSLOCP00000020722 | ENSLOCP00000002157 | SH3 and multiple ankyrin repeat domains 3a. | RAS, dexamethasone-induced 1. | 0.799 |
W5M8L8_LEPOC | nos1 | ENSLOCP00000004726 | ENSLOCP00000004098 | Si:dkey-34e4.1. | Nitric oxide synthase 1 (neuronal). | 0.933 |
W5M8L8_LEPOC | nos1ap | ENSLOCP00000004726 | ENSLOCP00000008704 | Si:dkey-34e4.1. | Nitric oxide synthase 1 (neuronal) adaptor protein a. | 0.881 |
W5M8L8_LEPOC | rasd1 | ENSLOCP00000004726 | ENSLOCP00000002157 | Si:dkey-34e4.1. | RAS, dexamethasone-induced 1. | 0.883 |
W5NJB2_LEPOC | SHANK3 | ENSLOCP00000020721 | ENSLOCP00000020722 | Uncharacterized protein. | SH3 and multiple ankyrin repeat domains 3a. | 0.972 |
W5NJB2_LEPOC | dock4 | ENSLOCP00000020721 | ENSLOCP00000019609 | Uncharacterized protein. | Dedicator of cytokinesis 4b; Belongs to the DOCK family. | 0.475 |
W5NJB2_LEPOC | rasd1 | ENSLOCP00000020721 | ENSLOCP00000002157 | Uncharacterized protein. | RAS, dexamethasone-induced 1. | 0.799 |
dock4 | SHANK3 | ENSLOCP00000019609 | ENSLOCP00000020722 | Dedicator of cytokinesis 4b; Belongs to the DOCK family. | SH3 and multiple ankyrin repeat domains 3a. | 0.475 |
dock4 | W5NJB2_LEPOC | ENSLOCP00000019609 | ENSLOCP00000020721 | Dedicator of cytokinesis 4b; Belongs to the DOCK family. | Uncharacterized protein. | 0.475 |
dock4 | rasd1 | ENSLOCP00000019609 | ENSLOCP00000002157 | Dedicator of cytokinesis 4b; Belongs to the DOCK family. | RAS, dexamethasone-induced 1. | 0.785 |
gnb5 | LOC102694494 | ENSLOCP00000016462 | ENSLOCP00000013238 | Guanine nucleotide binding protein (G protein), beta 5b. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.970 |
gnb5 | rasd1 | ENSLOCP00000016462 | ENSLOCP00000002157 | Guanine nucleotide binding protein (G protein), beta 5b. | RAS, dexamethasone-induced 1. | 0.884 |
itsn1 | itsn2 | ENSLOCP00000008086 | ENSLOCP00000001168 | Intersectin 1 (SH3 domain protein). | Intersectin 2b. | 0.982 |
itsn1 | rasd1 | ENSLOCP00000008086 | ENSLOCP00000002157 | Intersectin 1 (SH3 domain protein). | RAS, dexamethasone-induced 1. | 0.873 |
itsn2 | itsn1 | ENSLOCP00000001168 | ENSLOCP00000008086 | Intersectin 2b. | Intersectin 1 (SH3 domain protein). | 0.982 |
itsn2 | rasd1 | ENSLOCP00000001168 | ENSLOCP00000002157 | Intersectin 2b. | RAS, dexamethasone-induced 1. | 0.926 |
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