STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M1B1_LEPOCUncharacterized protein. (266 aa)    
Predicted Functional Partners:
W5M194_LEPOC
CUB domain-containing protein.
 
     0.934
mst1r
Macrophage stimulating 1 receptor b.
    
  0.717
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.717
itsn2
Intersectin 2b.
    
 0.702
RELN
Reelin.
    
 0.634
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.633
W5N2B9_LEPOC
Corin, serine peptidase.
    
 0.602
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.600
W5N1J9_LEPOC
Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.572
LOC107075384
Uncharacterized protein.
    
 0.570
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.