STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M1B2_LEPOCTransmembrane protein 161B. (523 aa)    
Predicted Functional Partners:
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.570
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.503
ggps1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
      
 0.424
mxra7
Uncharacterized protein.
      
 0.418
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
      
 0.414
sumf2
Sulfatase modifying factor 2.
      
 0.412
tafa3
Si:dkey-238f9.1.
      
 0.410
cwc22
CWC22 spliceosome associated protein homolog.
      
 0.407
W5MPD3_LEPOC
Coiled-coil domain containing 169.
      
 0.403
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.