STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
men1Multiple endocrine neoplasia I. (239 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.996
rbbp5
Retinoblastoma binding protein 5.
   
 0.993
wdr5
WD repeat domain 5.
    
 0.987
jund
BZIP domain-containing protein.
    
 
 0.987
PSIP1
PC4 and SFRS1 interacting protein 1.
    
 0.980
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.962
W5M8W3_LEPOC
Lysine (K)-specific methyltransferase 2Ba.
    
 0.955
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 0.955
HCFC1
Host cell factor C1.
    
 0.922
W5NCZ6_LEPOC
Host cell factor C2.
    
 0.922
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.