STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M231_LEPOCProtein kinase domain-containing protein. (350 aa)    
Predicted Functional Partners:
map3k1
Mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase.
   
 0.763
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.711
LOC102695888
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.711
grap2
GRB2 related adaptor protein 2a.
    
 
 0.655
traf1
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.518
W5M0W3_LEPOC
Mitogen-activated protein kinase kinase kinase 19.
   
 
0.514
LOC102684734
Mitogen-activated protein kinase kinase kinase 22.
   
  0.514
map3k2
Mitogen-activated protein kinase kinase kinase 2.
   
  0.514
map3k3
Mitogen-activated protein kinase kinase kinase 3.
   
  0.514
MAP3K11
Mitogen-activated protein kinase kinase kinase 11.
    
  0.493
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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