STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107075805BHLH domain-containing protein. (163 aa)    
Predicted Functional Partners:
TCF4
Transcription factor 4.
    
 0.767
W5MFW8_LEPOC
Transcription factor 3a.
    
 0.767
tcf12
Transcription factor 12.
    
 0.767
myog
Myogenin.
  
 
0.568
tbp
TATA box binding protein.
    
 0.565
tbpl1
TBP-like 1.
    
 0.565
mef2c
Myocyte enhancer factor 2ca.
    
 0.559
mef2b
Myocyte enhancer factor 2b.
    
 0.559
W5MNE8_LEPOC
Myocyte enhancer factor 2d.
    
 0.559
mef2a
Myocyte enhancer factor 2aa.
    
 0.559
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.