STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mppe1Metallophosphoesterase 1. (404 aa)    
Predicted Functional Partners:
W5N4U1_LEPOC
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
    
 
 0.793
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
  0.660
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 
 0.632
pigb
Mannosyltransferase.
    
 
 0.605
pgap2
Post-GPI attachment to proteins 2.
    
 
 0.591
cdc27
Cell division cycle 27.
      
 0.589
pigh
Phosphatidylinositol glycan anchor biosynthesis, class H.
    
 
 0.568
pigc
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.560
W5M1B9_LEPOC
Mitochondrial ribosomal protein L40.
      
 0.550
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.550
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.