Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102693234 | chrdl2 | ENSLOCP00000012104 | ENSLOCP00000002667 | Fras1 related extracellular matrix 1b. | Chordin-like 2. | 0.501 |
LOC102693234 | frem1 | ENSLOCP00000012104 | ENSLOCP00000013595 | Fras1 related extracellular matrix 1b. | Fras1 related extracellular matrix 1a. | 0.890 |
LOC102696301 | W5MSM4_LEPOC | ENSLOCP00000000470 | ENSLOCP00000011383 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.473 |
LOC102696301 | chrdl2 | ENSLOCP00000000470 | ENSLOCP00000002667 | Uncharacterized protein. | Chordin-like 2. | 0.544 |
LOC102696301 | ripk4 | ENSLOCP00000000470 | ENSLOCP00000005472 | Uncharacterized protein. | Receptor-interacting serine-threonine kinase 4. | 0.473 |
W5MSM4_LEPOC | LOC102696301 | ENSLOCP00000011383 | ENSLOCP00000000470 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.473 |
W5MSM4_LEPOC | chrdl2 | ENSLOCP00000011383 | ENSLOCP00000002667 | Protein kinase domain-containing protein. | Chordin-like 2. | 0.504 |
W5MSM4_LEPOC | fam20c | ENSLOCP00000011383 | ENSLOCP00000010623 | Protein kinase domain-containing protein. | FAM20C golgi associated secretory pathway kinase b. | 0.473 |
W5MSM4_LEPOC | met | ENSLOCP00000011383 | ENSLOCP00000019200 | Protein kinase domain-containing protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.560 |
W5MSM4_LEPOC | mst1r | ENSLOCP00000011383 | ENSLOCP00000013339 | Protein kinase domain-containing protein. | Macrophage stimulating 1 receptor b. | 0.560 |
W5MSM4_LEPOC | ptk7 | ENSLOCP00000011383 | ENSLOCP00000019563 | Protein kinase domain-containing protein. | Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.609 |
W5MSM4_LEPOC | ripk4 | ENSLOCP00000011383 | ENSLOCP00000005472 | Protein kinase domain-containing protein. | Receptor-interacting serine-threonine kinase 4. | 0.550 |
bmp4 | chrdl2 | ENSLOCP00000014922 | ENSLOCP00000002667 | Bone morphogenetic protein 4. | Chordin-like 2. | 0.493 |
chrdl2 | LOC102693234 | ENSLOCP00000002667 | ENSLOCP00000012104 | Chordin-like 2. | Fras1 related extracellular matrix 1b. | 0.501 |
chrdl2 | LOC102696301 | ENSLOCP00000002667 | ENSLOCP00000000470 | Chordin-like 2. | Uncharacterized protein. | 0.544 |
chrdl2 | W5MSM4_LEPOC | ENSLOCP00000002667 | ENSLOCP00000011383 | Chordin-like 2. | Protein kinase domain-containing protein. | 0.504 |
chrdl2 | bmp4 | ENSLOCP00000002667 | ENSLOCP00000014922 | Chordin-like 2. | Bone morphogenetic protein 4. | 0.493 |
chrdl2 | fam20c | ENSLOCP00000002667 | ENSLOCP00000010623 | Chordin-like 2. | FAM20C golgi associated secretory pathway kinase b. | 0.625 |
chrdl2 | frem1 | ENSLOCP00000002667 | ENSLOCP00000013595 | Chordin-like 2. | Fras1 related extracellular matrix 1a. | 0.501 |
chrdl2 | met | ENSLOCP00000002667 | ENSLOCP00000019200 | Chordin-like 2. | MET proto-oncogene, receptor tyrosine kinase. | 0.528 |
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