STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsdCathepsin D; Belongs to the peptidase A1 family. (398 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
     
 0.898
bcl2l1
BCL2 like 1.
     
 0.861
birc2
Baculoviral IAP repeat containing 2.
    
  0.857
W5NBB2_LEPOC
X-linked inhibitor of apoptosis.
    
  0.857
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.851
ctsb
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.824
agt
Angiotensinogen; Belongs to the serpin family.
    
 0.709
W5M1F3_LEPOC
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.693
W5MJU5_LEPOC
Cathepsin C; Belongs to the peptidase C1 family.
   
 0.682
ctsh
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.675
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.