STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx1T-box transcription factor 1. (494 aa)    
Predicted Functional Partners:
LOC102685130
Uncharacterized protein.
   
  
 0.701
rchy1
Ring finger and CHY zinc finger domain containing 1.
   
    0.688
nkx2-5
NK2 homeobox 5.
    
 
 0.596
prickle2
Prickle homolog 2b.
      
 0.585
prickle1
Prickle homolog 1a.
      
 0.580
vangl1
Vang-like protein.
      
 0.547
W5M341_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.540
hmx3
H6 family homeobox 3a.
    
 
 0.515
LOC102695387
Homeobox domain-containing protein.
    
 
 0.515
GSC2
Goosecoid homeobox 2.
    
 
 0.432
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]