Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLM1Golgi membrane protein 1. (425 aa)    
Predicted Functional Partners:
golph3
Golgi phosphoprotein 3.
    
 
 0.702
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
      
 0.694
fam20c
FAM20C golgi associated secretory pathway kinase b.
    
  0.679
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.656
get3
ATPase ASNA1; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. [...]
   
   0.632
tspan1
Tetraspanin.
      
 0.618
LOC102696301
Uncharacterized protein.
    
  0.562
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.558
W5M071_LEPOC
Homeobox protein cut-like.
    
   0.511
cux2
Homeobox protein cut-like.
    
   0.511
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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