STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnn2Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (304 aa)    
Predicted Functional Partners:
W5M6P3_LEPOC
WD repeat domain 90.
    
 
 0.899
pacrg
PARK2 co-regulated.
    
 
 0.766
efhb
EF-hand domain family, member B.
    
   0.743
W5ND57_LEPOC
Enkurin, TRPC channel interacting protein.
   
 
 0.731
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.655
W5M1L2_LEPOC
EF-hand domain (C-terminal) containing 2.
    
 
 0.655
WDR1
WD repeat domain 1.
   
 
 0.650
LOC102682940
DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.631
HGFAC
HGF activator.
   
 0.615
LOC102686996
Cilia and flagella associated protein 126.
   
   0.602
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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