STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102690076G_PROTEIN_RECEP_F1_2 domain-containing protein. (370 aa)    
Predicted Functional Partners:
LOC102685477
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
  
 
0.788
LOC102688480
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.609
LOC102686398
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.609
LOC102686598
Uncharacterized protein.
    
 0.609
arrb1
Arrestin, beta 1.
    
  0.564
sag
S-antigen; retina and pineal gland (arrestin) a.
    
  0.564
W5N6D1_LEPOC
Arrestin, beta 2a.
    
  0.564
W5NDI0_LEPOC
Arrestin_N domain-containing protein.
    
  0.564
pomc
Proopiomelanocortin b.
    
 0.554
edn1
Endothelin 1.
    
 0.521
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.