Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102682951 | tfap4 | ENSLOCP00000000989 | ENSLOCP00000003091 | Cyclin-dependent kinase inhibitor 1Cb. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.701 |
LOC102697525 | W5M2A3_LEPOC | ENSLOCP00000003242 | ENSLOCP00000002511 | RNA binding motif protein 4.3. | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | 0.562 |
LOC102697525 | W5NBR9_LEPOC | ENSLOCP00000003242 | ENSLOCP00000018078 | RNA binding motif protein 4.3. | CXXC finger protein 1a. | 0.448 |
LOC102697525 | tfap4 | ENSLOCP00000003242 | ENSLOCP00000003091 | RNA binding motif protein 4.3. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.517 |
W5M2A3_LEPOC | LOC102697525 | ENSLOCP00000002511 | ENSLOCP00000003242 | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | RNA binding motif protein 4.3. | 0.562 |
W5M2A3_LEPOC | W5MVX2_LEPOC | ENSLOCP00000002511 | ENSLOCP00000012531 | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | Upstream binding transcription factor, like. | 0.666 |
W5M2A3_LEPOC | W5NBR9_LEPOC | ENSLOCP00000002511 | ENSLOCP00000018078 | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | CXXC finger protein 1a. | 0.562 |
W5M2A3_LEPOC | tfap4 | ENSLOCP00000002511 | ENSLOCP00000003091 | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.583 |
W5M2A3_LEPOC | usf2 | ENSLOCP00000002511 | ENSLOCP00000006415 | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | Upstream transcription factor 2, c-fos interacting. | 0.637 |
W5MVX2_LEPOC | W5M2A3_LEPOC | ENSLOCP00000012531 | ENSLOCP00000002511 | Upstream binding transcription factor, like. | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | 0.666 |
W5MVX2_LEPOC | tfap4 | ENSLOCP00000012531 | ENSLOCP00000003091 | Upstream binding transcription factor, like. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.408 |
W5N7Y2_LEPOC | tfap4 | ENSLOCP00000016741 | ENSLOCP00000003091 | Bromodomain PHD finger transcription factor. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.612 |
W5NBR9_LEPOC | LOC102697525 | ENSLOCP00000018078 | ENSLOCP00000003242 | CXXC finger protein 1a. | RNA binding motif protein 4.3. | 0.448 |
W5NBR9_LEPOC | W5M2A3_LEPOC | ENSLOCP00000018078 | ENSLOCP00000002511 | CXXC finger protein 1a. | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. | 0.562 |
W5NBR9_LEPOC | tfap4 | ENSLOCP00000018078 | ENSLOCP00000003091 | CXXC finger protein 1a. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.505 |
cdkn1a | cdkn1b | ENSLOCP00000015421 | ENSLOCP00000020624 | Cyclin-dependent kinase inhibitor 1A. | Cyclin-dependent kinase inhibitor 1Ba. | 0.603 |
cdkn1a | tfap4 | ENSLOCP00000015421 | ENSLOCP00000003091 | Cyclin-dependent kinase inhibitor 1A. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.701 |
cdkn1b | cdkn1a | ENSLOCP00000020624 | ENSLOCP00000015421 | Cyclin-dependent kinase inhibitor 1Ba. | Cyclin-dependent kinase inhibitor 1A. | 0.603 |
cdkn1b | tfap4 | ENSLOCP00000020624 | ENSLOCP00000003091 | Cyclin-dependent kinase inhibitor 1Ba. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.701 |
gmnn | tfap4 | ENSLOCP00000005511 | ENSLOCP00000003091 | Geminin DNA replication inhibitor. | Transcription factor AP-4 (activating enhancer binding protein 4). | 0.508 |
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