STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga3Golgin A3. (1530 aa)    
Predicted Functional Partners:
W5NDJ0_LEPOC
ADP-ribosylation factor-like 1.
    
  0.739
rnd2
Rho family GTPase 2.
    
 0.721
paxip1
PAX interacting (with transcription-activation domain) protein 1.
   
 0.656
W5LZH3_LEPOC
Protein phosphatase 2, regulatory subunit A, beta b.
    
  0.645
vrk1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.640
vrk2
VRK serine/threonine kinase 2; Belongs to the protein kinase superfamily.
    
 0.640
W5NFN1_LEPOC
Zgc:162964.
   
 0.634
ppp2r2b
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.623
LOC102689847
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.623
cog3
Component of oligomeric golgi complex 3.
    
 0.589
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.