STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697333Solute carrier family 24 member 6a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (538 aa)    
Predicted Functional Partners:
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.767
LOC102693973
RAD23 homolog A, nucleotide excision repair protein b.
    
   0.550
rad23a
RAD23 homolog A, nucleotide excision repair protein a.
    
   0.550
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
   0.550
LOC102694849
Solute carrier family 8 member 4b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
0.462
slc8a3
Solute carrier family 8 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
0.461
W5NAH0_LEPOC
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
0.461
slc8a1
Solute carrier family 8 member 1b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
0.461
LOC102693234
Fras1 related extracellular matrix 1b.
   
 
 0.415
frem1
Fras1 related extracellular matrix 1a.
   
 
 0.415
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.