STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc11DnaJ (Hsp40) homolog, subfamily C, member 11a. (561 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.873
W5MY53_LEPOC
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
 0.837
tmem11
Transmembrane protein 11.
     
 0.732
samm50
SAMM50 sorting and assembly machinery component.
    
 0.679
W5MTQ7_LEPOC
NME/NM23 family member 8; Belongs to the NDK family.
  
 
 0.665
W5N0B4_LEPOC
Uncharacterized protein; Belongs to the NDK family.
  
 
 0.665
W5M4B9_LEPOC
TNF receptor-associated protein 1.
  
 0.662
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.656
W5MS35_LEPOC
Ankyrin repeat domain 45.
  
 0.656
mtx2
Metaxin 2.
   
 0.655
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.