STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35c2Solute carrier family 35 member C2. (362 aa)    
Predicted Functional Partners:
W5M4V6_LEPOC
Uncharacterized protein.
 
      0.897
slc35d1
Solute carrier family 35 member D1a.
   
  
 0.588
slc35b4
Solute carrier family 35 member B4.
      
 0.577
slc35b2
Solute carrier family 35 member B2.
      
 0.568
slc35c1
Solute carrier family 35 member C1.
   
  
 0.566
tmem144
Transmembrane protein 144a.
      
 0.560
slc35e1
Solute carrier family 35 member E1.
      
 0.549
slc35e3
Solute carrier family 35 member E3.
      
 0.546
rtca
RNA 3'-terminal phosphate cyclase.
   
  
 0.518
slc35b3
Solute carrier family 35 member B3.
      
 0.516
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.