STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M4F7_LEPOCDEP domain containing 5. (622 aa)    
Predicted Functional Partners:
W5LZS7_LEPOC
WD repeat domain 59.
   
 0.992
wdr24
WD repeat domain 24.
    
 0.992
nprl3
NPR3-like, GATOR1 complex subunit.
    
 0.992
W5NA75_LEPOC
NPR2 like, GATOR1 complex subunit.
    
 0.992
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.986
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
   
 0.984
W5LZN7_LEPOC
Uncharacterized protein.
 
  
  0.972
LOC102690405
Ras-related GTP binding A.
    
 0.970
W5N7S6_LEPOC
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.969
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.966
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.