STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102692431Olfactory receptor C family, h1. (860 aa)    
Predicted Functional Partners:
W5M6P3_LEPOC
WD repeat domain 90.
    
   0.594
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.483
W5N3J1_LEPOC
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.483
GABBR2
Gamma-aminobutyric acid (GABA) B receptor, 2.
    
0.467
homer2
Homer scaffold protein 2.
    
  0.454
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.454
TRIO
Trio Rho guanine nucleotide exchange factor a.
    
  0.441
W5MDZ1_LEPOC
Kalirin RhoGEF kinase a.
    
  0.441
ARHGEF25
DH domain-containing protein.
    
  0.441
W5LZ17_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.433
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.