STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbs12Bardet-Biedl syndrome 12. (690 aa)    
Predicted Functional Partners:
mkks
McKusick-Kaufman syndrome.
    
 0.879
BBS10
Bardet-Biedl syndrome 10.
    
 0.874
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.762
LOC102686141
Uncharacterized protein.
    
 0.716
tcp1
T-complex 1.
    
 0.716
cct8
Chaperonin containing TCP1, subunit 8 (theta).
    
 0.702
cct3
T-complex protein 1 subunit gamma.
    
 0.676
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.676
W5NGR3_LEPOC
T-complex protein 1 subunit delta.
    
 0.676
W5NH55_LEPOC
Chaperonin containing TCP1, subunit 2 (beta).
    
 0.676
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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