STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhg5Pleckstrin homology domain containing, family G (with RhoGef domain) member 5a. (912 aa)    
Predicted Functional Partners:
W5N5X9_LEPOC
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.913
tradd
Tnfrsf1a-associated via death domain.
    
 0.908
W5NF13_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.860
fadd
Fas associated via death domain.
   
 0.837
W5NEC4_LEPOC
Tumor necrosis factor, alpha-induced protein 3.
    
 0.814
chuk
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.781
W5LX48_LEPOC
TNF_2 domain-containing protein.
    
 0.757
W5LYQ5_LEPOC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.751
W5MD28_LEPOC
Neutral sphingomyelinase (N-SMase) activation associated factor.
    
 0.745
bag4
BCL2 associated athanogene 4.
    
 0.742
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.