STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfgap1ADP-ribosylation factor GTPase activating protein 1. (431 aa)    
Predicted Functional Partners:
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
   
0.961
W5NDB7_LEPOC
ADP-ribosylation factor GTPase activating protein 3.
   
0.961
W5LZR3_LEPOC
Small ArfGAP2.
    
0.900
smap1
Small ArfGAP 1.
    
0.900
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.877
W5NDJ0_LEPOC
ADP-ribosylation factor-like 1.
    
 0.864
arl5a
ADP-ribosylation factor-like 5A; Belongs to the small GTPase superfamily. Arf family.
   
 0.842
arf3
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.842
ARF1
ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.842
arl6
ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.842
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.