STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M5J5_LEPOCUncharacterized protein. (236 aa)    
Predicted Functional Partners:
W5M011_LEPOC
Uncharacterized protein.
  
 
  0.481
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.479
W5LZ07_LEPOC
Uncharacterized protein.
  
 
  0.476
W5LYY8_LEPOC
Uncharacterized protein.
  
 
  0.469
W5LWA5_LEPOC
Uncharacterized protein.
  
 
  0.466
cd79b
CD79b molecule, immunoglobulin-associated beta.
   
 0.462
W5MAE5_LEPOC
CD79a molecule, immunoglobulin-associated alpha.
   
 0.447
W5LYU7_LEPOC
Ig-like domain-containing protein.
  
 
  0.446
W5LWS1_LEPOC
Uncharacterized protein.
  
 
  0.442
W5MSG0_LEPOC
V-set_CD47 domain-containing protein.
    
  0.441
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.