STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cse1lCSE1 chromosome segregation 1-like (yeast). (973 aa)    
Predicted Functional Partners:
kpna1
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.976
kpna4
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.976
kpna3
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.976
kpna6
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.948
kpna5
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.948
LOC102695679
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.929
tmco6
Transmembrane and coiled-coil domains 6.
   
 0.891
W5N1M2_LEPOC
Sperm associated antigen 6.
   
 0.891
adgrd1
Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.890
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.890
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]