STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clg14h3orf33C18h3orf33 homolog (H. sapiens). (251 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.871
mrps18a
Mitochondrial ribosomal protein S18A.
   
 0.539
bard1
BRCA1 associated RING domain 1.
    
  0.513
mrps5
Mitochondrial ribosomal protein S5.
   
  0.500
YTHDC2
YTH domain containing 2.
    
  0.484
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.480
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.478
CYB5R4
Cytochrome b5 reductase 4.
    
  0.478
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.474
W5N7D6_LEPOC
Uncharacterized protein.
    
 0.474
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.