STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc33a1Solute carrier family 33 member 1. (535 aa)    
Predicted Functional Partners:
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.866
CYB5R4
Cytochrome b5 reductase 4.
    
  0.760
ppcs
Phosphopantothenoylcysteine synthetase.
 
    
 0.731
dnajb9
DnaJ heat shock protein family (Hsp40) member B9a.
  
   0.606
W5MYY8_LEPOC
J domain-containing protein.
  
   0.606
slc25a42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.571
W5NJ40_LEPOC
Epoxide hydrolase 2, cytoplasmic.
    
 0.560
W5ME96_LEPOC
Uncharacterized protein.
    
  0.545
W5MEB4_LEPOC
Uncharacterized protein.
    
  0.545
W5MZF5_LEPOC
Lipoxygenase homology domains 1b.
    
  0.545
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.