STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD12Sterile alpha motif domain containing 12. (164 aa)    
Predicted Functional Partners:
W5M6P5_LEPOC
Kinase suppressor of ras 2.
    
 0.616
W5MBH7_LEPOC
Kinase suppressor of ras 1b.
    
 0.616
cnksr2
Connector enhancer of kinase suppressor of Ras 2b.
    
 0.607
W5ND22_LEPOC
Si:ch211-26b3.4.
    
 0.607
W5NJN1_LEPOC
Cnksr family member 3.
    
 0.607
cnksr1
Connector enhancer of kinase suppressor of Ras 1.
    
 0.588
LOC107076329
PH domain-containing protein.
    
 0.515
raf1
Raf-1 proto-oncogene, serine/threonine kinase b.
    
 0.496
LOC102687735
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.496
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.496
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.