STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ext1Exostosin glycosyltransferase 1b; Belongs to the glycosyltransferase 47 family. (742 aa)    
Predicted Functional Partners:
ext2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
    
0.920
extl2
Exostosin-like glycosyltransferase 2.
    
0.852
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
   
0.744
LOC102690077
Threonine aldolase 1.
     
 0.656
psat1
Phosphoserine aminotransferase.
     
 0.643
sdc4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.508
sdc1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.508
sdc3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
 
 0.477
SDS
Serine dehydratase.
     
 0.472
LOC102698451
Serine dehydratase-like.
     
 0.472
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.