STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap221Si:ch73-222h13.1. (869 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.897
W5MG58_LEPOC
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
   
 
 0.756
SPAG17
Sperm associated antigen 17.
    
 
 0.748
W5M6B0_LEPOC
Si:ch73-81k8.2.
    
   0.697
W5MH71_LEPOC
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.697
CFAP69
Cilia and flagella associated protein 69.
    
   0.697
W5MZS5_LEPOC
Uncharacterized protein.
    
   0.697
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.697
LOC102685130
Uncharacterized protein.
    
 
 0.599
W5LW76_LEPOC
Serine/threonine-protein phosphatase.
    
   0.591
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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