STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dccDCC netrin 1 receptor. (1447 aa)    
Predicted Functional Partners:
W5N6Z1_LEPOC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.980
W5NEG4_LEPOC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.980
W5MDY0_LEPOC
RGM domain family, member D.
    
 0.952
ntn3
Netrin 2.
    
 0.903
ntn1
Netrin 1b.
    
 0.903
W5NAX9_LEPOC
Netrin 5.
    
 0.903
unc5b
Unc-5 netrin receptor B.
    
 0.887
unc5c
Unc-5 netrin receptor C.
    
 0.884
unc5a
Unc-5 netrin receptor A.
    
 0.882
rgma
Repulsive guidance molecule BMP co-receptor a.
   
 0.878
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.