STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnsCystinosin, lysosomal cystine transporter. (373 aa)    
Predicted Functional Partners:
LOC102692065
Si:dkey-24p1.6.
   
 
  0.631
SEL1L3
SEL1L family member 3.
   
 
  0.631
W5N6B6_LEPOC
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
  0.631
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
   
 
  0.631
slc66a1
Solute carrier family 66 member 1.
    
 
 0.615
shpk
Sedoheptulokinase.
   
  
 0.593
LOC107077872
Uncharacterized protein.
      
 0.590
hs1bp3
HCLS1 binding protein 3.
   
    0.575
LOC102686662
B-cell translocation gene 3.
      
 0.566
W5N043_LEPOC
Uncharacterized protein.
   
 
  0.536
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.