STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M6Z3_LEPOCVWFA domain-containing protein; Belongs to the integrin alpha chain family. (1124 aa)    
Predicted Functional Partners:
W5MRJ4_LEPOC
Integrin beta.
   
 0.937
LOC102697324
Tyrosine-protein kinase.
    
  0.867
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
     
 0.861
W5MJT7_LEPOC
V-crk avian sarcoma virus CT10 oncogene homolog.
     
 0.860
W5MV92_LEPOC
Fibronectin 1a.
   
 
  0.852
cd226
CD226 molecule.
     
 0.847
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.799
W5LWT8_LEPOC
Integrin_alpha2 domain-containing protein.
     
 
0.783
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.780
itgb7
Integrin beta; Belongs to the integrin beta chain family.
   
 0.780
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]