STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmpcaPeptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family. (564 aa)    
Predicted Functional Partners:
LOC102694440
Cytochrome c-1.
   
 0.998
LOC102687258
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.997
LOC102698357
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.990
LOC102682566
Ubiquinol-cytochrome c reductase core protein 1.
  
0.989
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
  
0.989
LOC102698686
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.986
ndufs1
NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family.
  
 0.983
W5M946_LEPOC
Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.
   
 0.979
W5M3U0_LEPOC
NADH:ubiquinone oxidoreductase core subunit V2.
   
 0.978
ndufs4
NADH:ubiquinone oxidoreductase subunit S4.
   
 0.975
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.