STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M730_LEPOCZinc finger, SWIM-type containing 7. (147 aa)    
Predicted Functional Partners:
swsap1
SWIM-type zinc finger 7 associated protein 1.
    
 0.934
paxx
PAXX non-homologous end joining factor.
     
  0.540
xrcc4
X-ray repair complementing defective repair in Chinese hamster cells 4.
     
  0.540
mlh1
MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli).
     
  0.540
ercc1
Excision repair cross-complementation group 1.
     
  0.540
ercc4
Excision repair cross-complementation group 4.
     
  0.540
W5MPN7_LEPOC
PMS1 homolog 2, mismatch repair system component.
     
  0.540
pms1
PMS1 homolog 1, mismatch repair system component.
     
  0.540
W5MR27_LEPOC
DNA ligase.
     
  0.540
xpa
Xeroderma pigmentosum, complementation group A.
     
  0.540
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.