STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697006SIN3-HDAC complex associated factor, like. (217 aa)    
Predicted Functional Partners:
sap130
Sin3A-associated protein a.
    
 0.896
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.853
brms1l
BRMS1 like transcriptional repressor b.
    
 0.851
sin3b
SIN3 transcription regulator family member B.
    
 0.820
W5ND19_LEPOC
SIN3 transcription regulator family member Aa.
    
 0.820
W5MSQ6_LEPOC
AT rich interactive domain 4A (RBP1-like).
   
 
 0.809
W5NG20_LEPOC
Translocase of outer mitochondrial membrane 20.
   
 
 0.809
sap30l
Sap30-like.
    
 
 0.776
ing1
Inhibitor of growth protein.
    
 
 0.768
W5N541_LEPOC
BAH domain and coiled-coil containing 1a.
    
   0.664
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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