STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc2a6Solute carrier family 2 member 6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (498 aa)    
Predicted Functional Partners:
W5MEN5_LEPOC
Mitochondrial ribosomal protein L15.
   
   0.663
W5MQY4_LEPOC
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.662
mrpl43
Mitochondrial ribosomal protein L43.
    
 
 0.658
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
    
   0.654
mrpl47
Mitochondrial ribosomal protein L47.
    
   0.654
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.654
W5M387_LEPOC
Mitochondrial ribosomal protein S14.
    
   0.654
mrpl34
Mitochondrial ribosomal protein L34.
    
   0.654
W5M5T1_LEPOC
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.654
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.654
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.