STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102691961Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins. (856 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
  0.741
LOC102695806
Junction plakoglobin b.
    
  0.741
W5M3L6_LEPOC
Catenin (cadherin-associated protein), alpha 2.
    
 0.710
W5M3Q5_LEPOC
Catenin (cadherin-associated protein), alpha 2.
    
 0.710
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.710
W5NII4_LEPOC
Uncharacterized protein.
    
  0.698
W5MC91_LEPOC
Cadherin 16, KSP-cadherin.
     
0.552
W5LVI8_LEPOC
Uncharacterized protein.
     
 
0.540
W5LXB8_LEPOC
APC regulator of WNT signaling pathway 2.
     
  0.540
cdh13
Cadherin 13, H-cadherin (heart).
     
 
0.540
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.